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Get some hands-on training with BrainGlobe and other open-source tools for image processing at the Neuroinformatics Unit Open Software Week , 11th-15th August 2025 in London!

BrainGlobe

  • About
  • Tutorials
  • Documentation
  • Community
  • Blog
    • Projects
  • GitHub
  • Twitter
  • Mastodon
  • Bluesky
  • Zulip (Developer chat)
  • image.sc (Help forum)
  • About
  • Tutorials
  • Documentation
  • Community
  • Blog
  • Projects
  • GitHub
  • Twitter
  • Mastodon
  • Bluesky
  • Zulip (Developer chat)
  • image.sc (Help forum)

Section Navigation

  • Developer’s guide
    • Introduction to the BrainGlobe codebase for developers
    • Tooling
    • Conventions
    • Testing
    • Publishing new releases
    • Specific Repository Developer Documentation
      • brainglobe-atlasapi
      • brainglobe-meta
      • brainglobe-utils
      • brainglobe-workflows
      • cellfinder.core
    • Code of conduct
  • Roadmaps
    • May 2024
    • November 2023
  • Releases
    • BrainGlobe version 1 overview
      • Version 1: changes to registration and segmentation tools
      • Version 1: Cellfinder migration and brainglobe-workflows
      • Version 1: changes to the cellfinder backend and plugin
  • Courses
    • Whole brain microscopy analysis with BrainGlobe and napari
    • October 7th-8th 2024
    • December 6th 2023
  • Software built by the community
  • Sample datasets
  • Community
  • Courses

Courses#

Details of BrainGlobe training courses:

Course materials#

  • Whole brain microscopy analysis with BrainGlobe and napari

Previous courses#

  • October 7th-8th 2024
  • December 6th 2023

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Version 1: changes to the cellfinder backend and plugin

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Whole brain microscopy analysis with BrainGlobe and napari
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  • Course materials
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