Posted in 2026

New mouse brain atlas based on gene expression

The CArea atlas has been added to BrainGlobe. Regions in this atlas are delineated based on clustering 3D volumes of gene expression, finding voxels with similar “gene expression fingerprints”. Data from over 1000 mice was used to generate both volumes of gene expression, and an average Nissl template. This template is a slightly improved and updated version the CCFv3BBP template (also in BrainGlobe as ccfv3augmented_mouse).

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New female rat brain atlases added to BrainGlobe

We’re excited to announce the release of two rat brain atlases generated at the Sainsbury Wellcome Centre (SWC), now available through the BrainGlobe ecosystem.

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