brainrender.atlas_specific.allen_brain_atlas.streamlines#

Description

Utilities for downloading and processing streamlines aligned to the Allen Mouse Brain Atlas.

Functions

experiments_source_search

Return data about experiments whose injection was in the structure of interest.

get_streamlines_data

Given a list of experiment IDs, download streamline data from the Allen mesoscale connectivity dataset hosted on Google Cloud Storage via cloud-volume, and save them as JSON files.

get_streamlines_for_region

Using the Allen Mouse Connectivity data and corresponding API, this function finds experiments whose injections were targeted to the region of interest and downloads the corresponding streamlines data from the Allen mesoscale connectivity dataset on Google Cloud Storage.